Stem-loop tca-mir-3856

Accession

MI0016333

Description

Tribolium castaneum tca-mir-3856 precursor miRNA

Sequence

gugugguuuuuuUGCAAGAAAGUCAUUUGAAcacuuucaauguuucgcaaacugAGUGAUUUUUCGUUGCGGAAauucaaguc
.....(..(((((((((((((((((((((((((.......)))))........)))))))))))..)))))))))..).....

Structure

gugug uu         --           --------     cu 
     g  uuuuUGCAA  GAAAGUCAUUU        GAAca  u
     |  |||||||||  |||||||||||        |||||  u
     c  aAAGGCGUU  UUUUUAGUGAg        uuugu  c
cugaa uu         GC           ucaaacgc     aa 

Annotation confidence Not enough data

Genome context

ChLG6: 2817630-2817712 [+]

Mature tca-miR-3856-5p

• Accession: MIMAT0018770
• Description: Tribolium castaneum tca-miR-3856-5p mature miRNA
• Sequence: 13 - UGCAAGAAAGUCAUUUGAA - 31
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3856-3p

• Accession: MIMAT0018771
• Description: Tribolium castaneum tca-miR-3856-3p mature miRNA
• Sequence: 55 - AGUGAUUUUUCGUUGCGGAA - 74
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696