Stem-loop tca-mir-3857

Accession

MI0016335

Description

Tribolium castaneum tca-mir-3857 precursor miRNA

Sequence

agaacgagaaauugggcuguggUGUGCCUUGAUACUAUCCCACGUguugcaggauggaacAGGUGUGGUGUCUCAAUGCUCaucauggcgcaauuuucauaug
.......(((((((.(((((((((.((.((((.((.(((.(((.((((.((...)).)))).))).))))).)))).)).))))))))).)))))))......

Structure

agaacga       g         U  C    U  U   C   G    g  g 
       gaaauug gcuguggUG GC UUGA AC AUC CAC Uguu ca  
       ||||||| ||||||||| || |||| || ||| ||| |||| || g
       uuuuaac cgguacuaC CG AACU UG UGG GUG Acaa gu  
-guauac       g         U  U    C  -   U   G    g  a 

Annotation confidence Not enough data

Genome context

ChLG6: 8180983-8181085 [+]

Mature tca-miR-3857-5p

• Accession: MIMAT0018774
• Description: Tribolium castaneum tca-miR-3857-5p mature miRNA
• Sequence: 23 - UGUGCCUUGAUACUAUCCCACGU - 45
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3857-3p

• Accession: MIMAT0018775
• Description: Tribolium castaneum tca-miR-3857-3p mature miRNA
• Sequence: 61 - AGGUGUGGUGUCUCAAUGCUC - 81
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696