Stem-loop tca-mir-3851e

Accession

MI0016338

Description

Tribolium castaneum tca-mir-3851e precursor miRNA

Sequence

9758 reads, 689.0 reads per million, 34 experiments

uguuugaauuuggcgccgCGUUGAUUUGGAGUCGUACUAUGguuuuugguacucacaUAGUACGUUCCGAAUCGACUaguuaacaaauuuuaaau
.(((((((((((.......((((((((((((.(((((((((..............))))))))))))))))))))).......)))).)))))))

Structure

u       -    gcgccgC            U         guuuuu 
 guuugaa uuug       GUUGAUUUGGAG CGUACUAUG      g
 ||||||| ||||       |||||||||||| |||||||||       
 uaaauuu aaac       CAGCUAAGCCUU GCAUGAUac      g
-       u    aauugaU            -         acucau 

Annotation confidence High

Genome context

ref|NC_007421.3|: 9958124-9958218 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from tca-mir-3851e

Mature tca-miR-3851e-5p

• Accession: MIMAT0018780
• Description: Tribolium castaneum tca-miR-3851e-5p mature miRNA
• Sequence: 19 - CGUUGAUUUGGAGUCGUACUAUG - 41
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3851e-3p

• Accession: MIMAT0018781
• Description: Tribolium castaneum tca-miR-3851e-3p mature miRNA
• Sequence: 58 - UAGUACGUUCCGAAUCGACU - 77
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696