Accession
MI0016339
Description
Tribolium castaneum
tca-mir-3858 precursor miRNA
Sequence
179
reads,
16.0
reads per million, 22 experiments
guuuuuuAGUGAAGCGAAGUUUUUUCAUUggccaauaaaaaaUGAAACUCUCUUGCUUCUCUAAUaaau
((((.((((.(((((((((...(((((((...........)))))))..)).))))))).)))).))))
((((.((((.(((((((((...(((((((...........)))))))..)).))))))).)))).))))
Structure
u U - UUU ggcc
guuu uuAG GAAGCGA AG UUUCAUU a
|||| |||| ||||||| || ||||||| a
uaaa AAUC CUUCGUU UC AAAGUaa u
U U C -UC aaaa
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ref|NC_007421.3|: 9956857-9956925 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from tca-mir-3858
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature tca-miR-3858-5p
| Accession | MIMAT0018782 |
| Description | Tribolium castaneum tca-miR-3858-5p mature miRNA |
| Sequence | 8 - AGUGAAGCGAAGUUUUUUCAUU - 29 |
| Evidence |
experimental
SOLID [1] |
Mature tca-miR-3858-3p
| Accession | MIMAT0018783 |
| Description | Tribolium castaneum tca-miR-3858-3p mature miRNA |
| Sequence | 43 - UGAAACUCUCUUGCUUCUCUAAU - 65 |
| Evidence |
experimental
SOLID [1] |
| Database links |
|
References
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