Stem-loop tca-mir-3861

Accession

MI0016346

Description

Tribolium castaneum tca-mir-3861 precursor miRNA

Sequence

10980 reads, 97.0 reads per million, 25 experiments

guuuaguguguuucgaaggguacuuaAUGGAAUUAUUUGGUAUCAAUUgauuuucgauuuaaUUGGUACCAUUUAAUUCCAUUUCGgaauuuucgaaauguucaugug
.....(((.((((((((((...(..((((((((((..(((((((((((((........)))))))))))))..))))))))))..)...))))))))))...)))...

Structure

guuua   --u          gua uu          UU             uuu 
     gug   guuucgaagg   c  aAUGGAAUUA  UGGUAUCAAUUga   u
     |||   ||||||||||   |  ||||||||||  |||||||||||||    
     uac   uaaagcuuuu   G  UUACCUUAAU  ACCAUGGUUaauu   c
--gug   uug          aag CU          UU             uag 

Annotation confidence High

Genome context

ref|NC_007423.3|: 4947159-4947266 [-]

Mature tca-miR-3861-5p

• Accession: MIMAT0018796
• Description: Tribolium castaneum tca-miR-3861-5p mature miRNA
• Sequence: 27 - AUGGAAUUAUUUGGUAUCAAUU - 48
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3861-3p

• Accession: MIMAT0018797
• Description: Tribolium castaneum tca-miR-3861-3p mature miRNA
• Sequence: 63 - UUGGUACCAUUUAAUUCCAUUUCG - 86
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696