miRBase entry: tca-mir-750

Stem-loop tca-mir-750

Accession

MI0016358

Description

Tribolium castaneum tca-mir-750 precursor miRNA

Literature search

1 open access papers mention tca-mir-750
(1 sentences)

Sequence

agaaagcaaagggcccuuGGGUGGAAGGUUGGAUCUUCGCAUGauucaaguugCCAGAUCUAACUCUUCCAUAUGACGgucauuugccaaca
.....(((((.((((.(((.((((((((((((((((..(((..........))).))))))))).))))))).))).)))).))))).....

Structure

agaaa     g    c   G       -         UC   UGau 
     gcaaa ggcc uuG GUGGAAG GUUGGAUCU  GCA    u
     ||||| |||| ||| ||||||| |||||||||  |||     
     cguuu cugG AGU UACCUUC CAAUCUAGA  Cgu    c
acaac     a    C   A       U         -C   ugaa

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

ChLG4: 9316826-9316917 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tca-mir-750

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tca-miR-750-5p

Accession	MIMAT0018820
Description	Tribolium castaneum tca-miR-750-5p mature miRNA
Sequence	19 - GGGUGGAAGGUUGGAUCUUCGCAUG - 43
Evidence	experimental SOLID [1]
Database links

Mature tca-miR-750-3p

Accession	MIMAT0018821
Description	Tribolium castaneum tca-miR-750-3p mature miRNA
Sequence	54 - CCAGAUCUAACUCUUCCAUAUGACG - 78
Evidence	experimental SOLID [1]
Database links

References

PubMed ID: 20817720
Functional shifts in insect microRNA evolution
"Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
"Genome Biol Evol (2010) 2:686-696