Stem-loop tca-mir-3868

Accession

MI0016362

Description

Tribolium castaneum tca-mir-3868 precursor miRNA

Sequence

guaaacggaauuaaaguACCAGCACCAGUAUGUAUUuuguaugcauucuuuuuacaacaauuuaugcaacaagaaAUCAACUAAAGUUUAAUUUugauucugauggu
.....((((((((((((...(((...(((..((.((((((.(((((.................))))))))))).))..)))...)))..)))))))))))).....

Structure

guaaa            ACC   ACC   AU  A      a     ucuuuuu 
     cggaauuaaagu   AGC   AGU  GU UUuugu ugcau       a
     ||||||||||||   |||   |||  || |||||| |||||       c
     gucuuaguUUUA   UUG   UCA  UA agaaca acgua       a
uggua            -AU   AAA   AC  a      -     uuuaaca 

Annotation confidence Not enough data

Genome context

ChLG3: 20947488-20947594 [-]

Mature tca-miR-3868-5p

• Accession: MIMAT0018828
• Description: Tribolium castaneum tca-miR-3868-5p mature miRNA
• Sequence: 18 - ACCAGCACCAGUAUGUAUU - 36
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3868-3p

• Accession: MIMAT0018829
• Description: Tribolium castaneum tca-miR-3868-3p mature miRNA
• Sequence: 76 - AUCAACUAAAGUUUAAUUU - 94
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696