Stem-loop tca-mir-3877

Accession

MI0016371

Description

Tribolium castaneum tca-mir-3877 precursor miRNA

Sequence

199 reads, 14.0 reads per million, 23 experiments

gucAACCUUCCAAAAAAGCACUCguuugguuacuaaauaaccaagUGAGUUGUCACUGGAAGGAGAga
.....(((((((.....(((((((((((((((.....)))))))))))).)))...))))))).....

Structure

gucAA       AAAAA   -            c 
     CCUUCCA     GCA CUCguuugguua u
     |||||||     ||| |||||||||||| a
     GGAAGGU     UGU GAGUgaaccaau a
agAGA       --CAC   U            a 

Annotation confidence High

Genome context

ref|NC_007424.3|: 11502019-11502086 [-]

Mature tca-miR-3877-5p

• Accession: MIMAT0018846
• Description: Tribolium castaneum tca-miR-3877-5p mature miRNA
• Sequence: 4 - AACCUUCCAAAAAAGCACUC - 23
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3877-3p

• Accession: MIMAT0018847
• Description: Tribolium castaneum tca-miR-3877-3p mature miRNA
• Sequence: 46 - UGAGUUGUCACUGGAAGGAGA - 66
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696