Stem-loop tca-mir-3879

Accession

MI0016373

Description

Tribolium castaneum tca-mir-3879 precursor miRNA

Sequence

caauUGGGUUAUUGUGUGCCGGUcauuacaucauuacaggucauguaAACCGGCCAUAAAGCCCUCaac
.....(((((.(((((.((((((..((((((.(((...))).)))))))))))))))))))))).....

Structure

caauU     A     U      ca      c   a 
     GGGUU UUGUG GCCGGU  uuacau auu  
     ||||| ||||| ||||||  |||||| ||| c
     CCCGA AAUAC CGGCCA  Aaugua ugg  
caaCU     -     -      --      c   a 

Annotation confidence Not enough data

Genome context

ChLG4: 4106596-4106664 [-]

Mature tca-miR-3879-5p

• Accession: MIMAT0018850
• Description: Tribolium castaneum tca-miR-3879-5p mature miRNA
• Sequence: 5 - UGGGUUAUUGUGUGCCGGU - 23
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3879-3p

• Accession: MIMAT0018851
• Description: Tribolium castaneum tca-miR-3879-3p mature miRNA
• Sequence: 48 - AACCGGCCAUAAAGCCCUC - 66
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696