Stem-loop tca-mir-3882

Accession

MI0016378

Description

Tribolium castaneum tca-mir-3882 precursor miRNA

Sequence

ucuccgcacUUGACACAUCGGUGUUCUACCAUGCAguuccucugugcgUGGAAGAAUCGCUAACACCGAUGGCAcugagcuguuu
.....(((((((...((((((((((((.(((((((.........))))))).))).......)))))))))....)))).)))..

Structure

ucucc   -    -ACA         -------   A       guu 
     gca cUUG    CAUCGGUGU       UCU CCAUGCA   c
     ||| ||||    |||||||||       ||| |||||||   c
     ugu gagu    GUAGCCACA       AGA GGUgcgu   u
---uu   c    cACG         AUCGCUA   A       guc 

Annotation confidence Not enough data

Genome context

Unmapped29: 14499-14583 [-]

Mature tca-miR-3882-5p

• Accession: MIMAT0018860
• Description: Tribolium castaneum tca-miR-3882-5p mature miRNA
• Sequence: 10 - UUGACACAUCGGUGUUCUACCAUGCA - 35
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3882-3p

• Accession: MIMAT0018861
• Description: Tribolium castaneum tca-miR-3882-3p mature miRNA
• Sequence: 49 - UGGAAGAAUCGCUAACACCGAUGGCA - 74
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696