Stem-loop tca-mir-3885

Accession

MI0016382

Description

Tribolium castaneum tca-mir-3885 precursor miRNA

Sequence

3 reads, 5.0 reads per million, 3 experiments

aacaacgAAGGCGGCGGCGGCGGCCGaugcgcuuuuuuuucacuguuaaugaauggcaagugugcGGGUUUUGUUUUUACGUUUucggguaa
.....((((((((..(((((.(.(((.(((((((.((.((((.......)))).)).)))))))))).).)))))....)))))))).....

Structure

aacaa        --GC     C G   a       u  u    cu 
     cgAAGGCG    GGCGG G CCG ugcgcuu uu uuca  g
     ||||||||    ||||| | ||| ||||||| || ||||  u
     gcuUUUGC    UUGUU U GGc gugugaa gg aagu  u
aaugg        AUUU     U G   -       c  u    aa 

Annotation confidence Not enough data

Genome context

ref|NC_007425.3|: 4597005-4597096 [-]

Mature tca-miR-3885-5p

• Accession: MIMAT0018868
• Description: Tribolium castaneum tca-miR-3885-5p mature miRNA
• Sequence: 8 - AAGGCGGCGGCGGCGGCCG - 26
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3885-3p

• Accession: MIMAT0018869
• Description: Tribolium castaneum tca-miR-3885-3p mature miRNA
• Sequence: 66 - GGGUUUUGUUUUUACGUUU - 84
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696