miRBase entry: tca-mir-3886

Stem-loop tca-mir-3886


Accession
MI0016383
Description
Tribolium castaneum tca-mir-3886 precursor miRNA


Sequence

uacaacUCACAGCGAGCUUUGACAGgugaugaggguggugaggauggcgauuauUAUCGGUUAUAUAUCAGUGGuagggagcgg
.....(((((.((((....((((.((((((((..((.((....)).))..)))))))).))))....)).)).)).))).....

Structure
uacaa   -  A  -  GCUU    A        gg  g  g 
     cUC AC GC GA    UGAC Ggugauga  gu gu a
     ||| || || ||    |||| ||||||||  || ||  
     ggg uG UG CU    AUUG CUAUuauu  cg ua g
ggcga   a  G  A  AUAU    G        ag  g  g 


Annotation confidence Not enough data
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Genome context
ChLGX: 3178840-3178923 [+]

Database links

Mature tca-miR-3886-5p

Accession MIMAT0018870
Description Tribolium castaneum tca-miR-3886-5p mature miRNA
Sequence 7 - UCACAGCGAGCUUUGACAG - 25
Evidence experimental
SOLID [1]

Mature tca-miR-3886-3p

Accession MIMAT0018871
Description Tribolium castaneum tca-miR-3886-3p mature miRNA
Sequence 55 - UAUCGGUUAUAUAUCAGUGG - 74
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696