Stem-loop tca-mir-3887

Accession

MI0016384

Description

Tribolium castaneum tca-mir-3887 precursor miRNA

Sequence

gagauGGGGUUGUCAUAAAAACGCaccccuuauuuaacaacgaauauaaccuugUGGCGCCUUUUUAUUCCAAcuccuaaug
.....(((((((..(((((((.((.((............((((........)))))).)).)))))))..))))))).....

Structure

gagau       UC       C  a  ccuuauuuaaca    aua 
     GGGGUUG  AUAAAAA GC cc            acga   u
     |||||||  ||||||| || ||            ||||    
     ccucAAC  UAUUUUU CG GG            Uguu   a
guaau       CU       C  C  ------------    cca 

Annotation confidence Not enough data

Genome context

ChLGX: 5066716-5066797 [+]

Mature tca-miR-3887-5p

• Accession: MIMAT0018872
• Description: Tribolium castaneum tca-miR-3887-5p mature miRNA
• Sequence: 6 - GGGGUUGUCAUAAAAACGC - 24
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3887-3p

• Accession: MIMAT0018873
• Description: Tribolium castaneum tca-miR-3887-3p mature miRNA
• Sequence: 55 - UGGCGCCUUUUUAUUCCAA - 73
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696