Accession
MI0016386
Description
Tribolium castaneum
tca-mir-3889 precursor miRNA
Sequence
25724
reads,
1092.0
reads per million, 34 experiments
uguaauaaacucacaaaaugcgACUUGUUCUCUCUGUAUUGUGUggaguugcucaUAGUACGGAUUGAACACGUCGCUGuuuuugaguuuacgcuu
.....((((((((.(((..(((((.(((((..(((((((((((.(......).)))))))))))..))))).)))))..))).)))))))).....
.....((((((((.(((..(((((.(((((..(((((((((((.(......).)))))))))))..))))).)))))..))).)))))))).....
Structure
uguaa c au U UC U ga
uaaacuca aaa gcgAC UGUUC UCUGUAUUGUG g g
|||||||| ||| ||||| ||||| ||||||||||| |
auuugagu uuu CGCUG ACAAG AGGCAUGAUac c u
uucgc u GU C UU u gu
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
ref|NC_007418.3|: 15689422-15689517 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from tca-mir-3889
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature tca-miR-3889-5p
| Accession | MIMAT0018876 |
| Description | Tribolium castaneum tca-miR-3889-5p mature miRNA |
| Sequence | 23 - ACUUGUUCUCUCUGUAUUGUGU - 44 |
| Evidence |
experimental
SOLID [1] |
Mature tca-miR-3889-3p
| Accession | MIMAT0018877 |
| Description | Tribolium castaneum tca-miR-3889-3p mature miRNA |
| Sequence | 56 - UAGUACGGAUUGAACACGUCGCUG - 79 |
| Evidence |
experimental
SOLID [1] |
| Database links |
|
References
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