Stem-loop tca-mir-3791

Accession

MI0016389

Description

Tribolium castaneum tca-mir-3791 precursor miRNA

Sequence

322561 reads, 16987.0 reads per million, 33 experiments

aucaaguuaaacguuCGGUGGUUUUAUUACGGUGGUUgcgauuuuuacaaUCACCGGGUAGAAAUCAUCUCAUGuuuaaccaaau
.....(((((((((..(((((((((....(((((((((.........)))))))))....)))))))))..))))))))).....

Structure

aucaa         uC         AUUA         cga 
     guuaaacgu  GGUGGUUUU    CGGUGGUUg   u
     |||||||||  |||||||||    |||||||||   u
     caauuuGUA  CUACUAAAG    GCCACUaac   u
uaaac         CU         AUGG         auu 

Annotation confidence High

Genome context

ref|NC_007420.3|: 7457536-7457620 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from tca-mir-3791

Mature tca-miR-3791-5p

• Accession: MIMAT0018882
• Description: Tribolium castaneum tca-miR-3791-5p mature miRNA
• Sequence: 16 - CGGUGGUUUUAUUACGGUGGUU - 37
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3791-3p

• Accession: MIMAT0018883
• Description: Tribolium castaneum tca-miR-3791-3p mature miRNA
• Sequence: 51 - UCACCGGGUAGAAAUCAUCUCAUG - 74
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696