Stem-loop tca-mir-3892

Accession

MI0016390

Description

Tribolium castaneum tca-mir-3892 precursor miRNA

Sequence

auuucguuAACCCCUGGUGGAAAACCCauacauuuguuuAAGUGUGGUUAAUUCACAUUGGGGGCauaauaauuc
..........((((((((((((...((((((..........))))))....))).)))))))))...........

Structure

-auuucguuAA         -   -AAC      auuu 
           CCCCUGGUG GAA    CCauac    g
           ||||||||| |||    ||||||     
           GGGGGUUAC CUU    GGUGUG    u
cuuaauaauaC         A   AAUU      AAuu 

Annotation confidence Not enough data

Genome context

ChLG5: 14781729-14781803 [+]

Mature tca-miR-3892-5p

• Accession: MIMAT0018884
• Description: Tribolium castaneum tca-miR-3892-5p mature miRNA
• Sequence: 9 - AACCCCUGGUGGAAAACCC - 27
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3892-3p

• Accession: MIMAT0018885
• Description: Tribolium castaneum tca-miR-3892-3p mature miRNA
• Sequence: 40 - AAGUGUGGUUAAUUCACAUUGGGGGC - 65
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696