Stem-loop tca-mir-3894

Accession

MI0016393

Description

Tribolium castaneum tca-mir-3894 precursor miRNA

Sequence

ugaaauuugcGGUUUUAAUUCCAUAAUGCAgacgauuuuuacgacggcggaacgugaGCGGUUUAUUGGAAUUAAUUguaaacaaaa
.....((((((((..((((((((...(((..(((.((((..(...)..)))))))..)))......)))))))))))))))).....

Structure

ugaaa        UU        ---UAA   Ag   a    ua g 
     uuugcGGU  UAAUUCCA      UGC  acg uuuu  c  
     ||||||||  ||||||||      |||  ||| ||||  | a
     aaaugUUA  AUUAAGGU      GCG  ugc aagg  g  
aaaac        --        UAUUUG   ag   -    cg c 

Annotation confidence Not enough data

Genome context

ChLG7: 9418908-9418994 [-]

Mature tca-miR-3894-5p

• Accession: MIMAT0018890
• Description: Tribolium castaneum tca-miR-3894-5p mature miRNA
• Sequence: 11 - GGUUUUAAUUCCAUAAUGCA - 30
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3894-3p

• Accession: MIMAT0018891
• Description: Tribolium castaneum tca-miR-3894-3p mature miRNA
• Sequence: 58 - GCGGUUUAUUGGAAUUAAUU - 77
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696