Stem-loop tca-mir-3896

Accession

MI0016395

Description

Tribolium castaneum tca-mir-3896 precursor miRNA

Sequence

ccgauuuugacAUAUCUCGAGUGAAAUUCCAacgacgggcugggucuccaaccggagcuaacagacacuagauuagAACUGCAAACGGAUAAGGUcaaauuuuu
.....((((((.((((.((..((...(((.........((((((.((((....))))))..))).).........)))...))..))))))..)))))).....

Structure

ccgau      -A    U  AG  AAA   CAacgacgg -   --  u    a 
     uuugac  UAUC CG  UG   UUC         g cug  gg cucc a
     ||||||  |||| ||  ||   |||         | |||  || ||||  
     aaacUG  AUAG GC  AC   AAg         c gac  uc gagg c
uuuuu      GA    -  AA  GUC   auuagauca a   aa  -    c 

Annotation confidence Not enough data

Genome context

ChLG8: 4771979-4772082 [+]

Mature tca-miR-3896-5p

• Accession: MIMAT0018894
• Description: Tribolium castaneum tca-miR-3896-5p mature miRNA
• Sequence: 12 - AUAUCUCGAGUGAAAUUCCA - 31
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3896-3p

• Accession: MIMAT0018895
• Description: Tribolium castaneum tca-miR-3896-3p mature miRNA
• Sequence: 77 - AACUGCAAACGGAUAAGGU - 95
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696