Stem-loop tca-mir-3897

Accession

MI0016397

Description

Tribolium castaneum tca-mir-3897 precursor miRNA

Sequence

caaaaguguuuacuuCACUCUCGCCUUCGCCGGCAuggcgcugauggccgcCGUGGUGGUGGGGGUGGGGguggcacggcgc
.....(((((....((((((((((((((((((.(((((((((...)).))))))).))))))))))))))))))...)))))

Structure

caaaa     uacu                  G       -  g 
     guguu    uCACUCUCGCCUUCGCCG CAuggcg cu  
     |||||    |||||||||||||||||| ||||||| || a
     cgcgg    ggugGGGGUGGGGGUGGU GUGCcgc gg  
-----     -cac                  G       c  u 

Annotation confidence Not enough data

Genome context

ChLG4: 554633-554714 [-]

Mature tca-miR-3897-5p

• Accession: MIMAT0018898
• Description: Tribolium castaneum tca-miR-3897-5p mature miRNA
• Sequence: 16 - CACUCUCGCCUUCGCCGGCA - 35
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3897-3p

• Accession: MIMAT0018899
• Description: Tribolium castaneum tca-miR-3897-3p mature miRNA
• Sequence: 52 - CGUGGUGGUGGGGGUGGGG - 70
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696