Stem-loop tca-mir-3900

Accession

MI0016400

Description

Tribolium castaneum tca-mir-3900 precursor miRNA

Sequence

auuuugucccauuuuucUGGGGGUGGCACCUCCUUGcgaAGGAGGUGUGAUCGCUUUGaauggcacuacug
.....((.((((((....((.(((.((((((((((...)))))))))).))).))..)))))).)).....

Structure

auuuu  c      uucU  G   G          G 
     gu ccauuu    GG GGU GCACCUCCUU  
     || ||||||    || ||| |||||||||| c
     ca gguaaG    UC CUA UGUGGAGGAa  
gucau  c      --UU  G   G          g 

Annotation confidence Not enough data

Genome context

ChLG3: 21492860-21492930 [-]

Mature tca-miR-3900-5p

• Accession: MIMAT0018904
• Description: Tribolium castaneum tca-miR-3900-5p mature miRNA
• Sequence: 18 - UGGGGGUGGCACCUCCUUG - 36
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3900-3p

• Accession: MIMAT0018905
• Description: Tribolium castaneum tca-miR-3900-3p mature miRNA
• Sequence: 40 - AGGAGGUGUGAUCGCUUUG - 58
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696