miRBase entry: tca-mir-3903

Stem-loop tca-mir-3903


Accession
MI0016403
Description
Tribolium castaneum tca-mir-3903 precursor miRNA


Sequence

cuucuauuuauuuauguuggggagugaagugccauuuuacuuuuaguaaaacAUAUUACAUACUAUUCCAAccguaauuaagucuaga
..((((((((.(((((((((((((((.((((...(((((((...)))))))..))))...)))).)))))).))))).)))))..)))

Structure
cu   --     u     -      -    --a    cca       u 
  ucu  auuua uuaug uugggg agug   agug   uuuuacu  
  |||  ||||| ||||| |||||| ||||   ||||   ||||||| u
  aga  ugaau aaugc AACCUU UCAU   UUAU   aaaauga  
--   uc     u     c      A    ACA    -Ac       u 


Annotation confidence Not enough data
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Genome context
ChLGX: 7082543-7082630 [+]

Database links

Mature tca-miR-3903-3p

Accession MIMAT0018910
Description Tribolium castaneum tca-miR-3903-3p mature miRNA
Sequence 53 - AUAUUACAUACUAUUCCAA - 71
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696