Stem-loop gma-MIR4351

Accession

MI0016481

Description

Glycine max gma-MIR4351 precursor miRNA

Sequence

9664 reads, 45.0 reads per million, 178 experiments

uugggauuugggacuaacugaAUUGGGAUUCAGUUGGAGUUGGuuacagaaguucaacugaauugggauucaguugaaccuuuuucaguuguaauucucuguucugaguucuucuucUGUAACCAACUCUAACUGAAUaccaauucaauuagucccaaaucccaa
.((((((((((((((((.((((((((..((((((((((((((((((((((((..((((((((..(((.(((....))))))..)))))))).....(((......))).....))))))))))))))))))))))))..)))))))).)))))))))))))))).

Structure

u                c        GA                        --------------------uu        uu   a   a 
 ugggauuugggacuaa ugaAUUGG  UUCAGUUGGAGUUGGuuacagaag                      caacugaa  ggg uuc g
 |||||||||||||||| ||||||||  ||||||||||||||||||||||||                      ||||||||  ||| |||  
 acccuaaacccugauu acuuaacc  AAGUCAAUCUCAACCAAUGUcuuc                      guugacuu  ucc aag u
a                a        aU                        uucuugagucuugucucuuaau        uu   -   u 

Annotation confidence Low

Genome context

Unknown

Mature gma-miR4351-5p

• Accession: MIMAT0018240
• Description: Glycine max gma-miR4351-5p mature miRNA
• Sequence: 22 - AUUGGGAUUCAGUUGGAGUUGG - 43
• Evidence: experimental ; Illumina [1]

Mature gma-miR4351-3p

• Accession: MIMAT0054073
• Description: Glycine max gma-miR4351-3p mature miRNA
• Sequence: 118 - UGUAACCAACUCUAACUGAAU - 138
• Evidence: experimental ; unknown

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14