Stem-loop gma-MIR4392

Accession

MI0016546

Description

Glycine max gma-MIR4392 precursor miRNA

Sequence

acacuuccgagucauauuuucgcauagaaaagccaccgaacaggaacuuguuacauaccaaggaucgaucggaaguuuuuuucUCUGCGAAAAUGUGAUUUCGGAacugu
(((.((((((((((((((((((((.((((((((..((((...((..((((........))))..))..))))..))..)))))).))))))))))))).))))))).)))

Structure

   c       -             u      --  ca    aca  aa    uua 
aca uuccgag ucauauuuucgca agaaaa  gc  ccga   gg  cuug   c
||| ||||||| ||||||||||||| ||||||  ||  ||||   ||  ||||    
ugu aAGGCUU AGUGUAAAAGCGU Ucuuuu  ug  ggcu   cu  gaac   a
   c       U             C      uu  aa    -ag  ag    cau 

Annotation confidence Not enough data

Genome context

chr9: 49977292-49977401 [+]

Mature gma-miR4392

• Accession: MIMAT0018305
• Description: Glycine max gma-miR4392 mature miRNA
• Sequence: 84 - UCUGCGAAAAUGUGAUUUCGGA - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14