Stem-loop gma-MIR4413a

Accession

MI0016579

Description

Glycine max gma-MIR4413a precursor miRNA

Literature search

8 open access papers mention gma-MIR4413a
(16 sentences)

Sequence

1268865 reads, 1722.0 reads per million, 177 experiments

ucaucaauAAGAGAAUUGUAAGUCACUGuauuaauuaggaacuguugauuagaugcaugauacaGUGACUUACAAUUCUCUUAUUaa
.....((((((((((((((((((((((((((((....(.(.(((.....))).).).))))))))))))))))))))))))))))..

Structure

ucauc                            auua g a   u 
     aauAAGAGAAUUGUAAGUCACUGuauua    g a cug u
     ||||||||||||||||||||||||||||    | | ||| g
     UUAUUCUCUUAACAUUCAGUGacauagu    c u gau a
---aa                            ---a g a   u 

Annotation confidence High

Genome context

chr19: 1832822-1832908 [+]

Mature gma-miR4413a-5p

• Accession: MIMAT0018338
• Description: Glycine max gma-miR4413a-5p mature miRNA
• Sequence: 9 - AAGAGAAUUGUAAGUCACUG - 28
• Evidence: experimental ; Illumina [1-2]

Mature gma-miR4413a-3p

• Accession: MIMAT0054160
• Description: Glycine max gma-miR4413a-3p mature miRNA
• Sequence: 65 - GUGACUUACAAUUCUCUUAUU - 85
• Evidence: experimental ; unknown

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14


2. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153