Stem-loop osa-MIR1862g

Accession

MI0017249

Description

Oryza sativa osa-MIR1862g precursor miRNA

Literature search

11 open access papers mention osa-MIR1862g
(14 sentences)

Sequence

122211 reads, 399.0 reads per million, 142 experiments

ccaaaauaaacaaacaucgugauaggAUGUGACACAUCAUAGUAacgagucugaacacguagaauauccagauucguuguauuaggaugugucacaauuuaguAUGAGGUUGGUUUAUUUUGG
(((((((((((.(((.(((((.((((.(((((((((((.((((((((((((((...............)))))))))..))))).))))))))))).)))).))))).))).)))))))))))

Structure

           a   a     a    A           A     --         aacacg 
ccaaaauaaac aac ucgug uagg UGUGACACAUC UAGUA  acgagucug      u
||||||||||| ||| ||||| |||| ||||||||||| |||||  |||||||||      a
GGUUUUAUUUG UUG AGUAu auuu acacuguguag auuau  ugcuuagac      g
           G   G     g    a           g     gu         cuauaa 

Annotation confidence Low

Genome context

4: 20340401-20340523 [-]

Mature osa-miR1862g-5p

• Accession: MIMAT0056166
• Description: Oryza sativa osa-miR1862g-5p mature miRNA
• Sequence: 27 - AUGUGACACAUCAUAGUA - 44
• Evidence: experimental ; unknown

Mature osa-miR1862g-3p

• Accession: MIMAT0019670
• Description: Oryza sativa osa-miR1862g-3p mature miRNA
• Sequence: 104 - AUGAGGUUGGUUUAUUUUGG - 123
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21113019
   Identification and analysis of seven H(2)O(2)-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica)
   "Li T, Li H, Zhang YX, Liu JY"
   "Nucleic Acids Res (2011) 39:2821-2833