Identification and analysis of seven H(2)O(2)-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica) |
|
|---|---|
| PubMed ID | 21113019 |
| Authors | "Li T, Li H, Zhang YX, Liu JY" |
| Journal | "Nucleic Acids Res |
| Volume | 39 |
| Pages | 2821-2833 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| osa-MIR812k | MI0017245 | 3869 | 1 | 37983959 | 37984184 | + | Medium |
| osa-MIR812l | MI0017246 | 3629 | None | None | Medium | ||
| osa-MIR812m | MI0017247 | 3625 | 8 | 20574659 | 20574845 | + | Medium |
| osa-MIR1862f | MI0017248 | 880 | 1 | 8208363 | 8208439 | - | Medium |
| osa-MIR1862g | MI0017249 | 977 | 4 | 20340401 | 20340523 | - | Low |
| osa-MIR3979 | MI0017251 | 154 | 11 | 19480150 | 19480263 | + | High |
| osa-MIR3980a | MI0017252 | 166 | None | None | High | ||
| osa-MIR3980b | MI0017253 | 163 | None | None | High | ||
| osa-MIR812n | MI0017254 | 320 | 8 | 14108082 | 14108284 | - | Medium |
| osa-MIR812o | MI0017255 | 148 | 10 | 20655529 | 20655699 | + | Medium |
| osa-MIR3981 | MI0017256 | 126 | 5 | 4302813 | 4302938 | + | Low |
| osa-MIR2873b | MI0017257 | 67 | 2 | 18974743 | 18974902 | + | Low |
| osa-MIR3982 | MI0017258 | 18 | 11 | 1384740 | 1384958 | - | Medium |
| osa-MIR811d | MI0017250 | 966 | None | None | Low | ||
| ptc-MIR319a | MI0002296 | None | CM000337.2 | 7887933 | 7888120 | - | High |
| ptc-MIR827 | MI0007041 | None | CM000343.2 | 120916 | 120991 | + | - |
| ptc-MIR408 | MI0002352 | None | CM000338.2 | 14802196 | 14802300 | + | High |
| ptc-MIR156l | MI0022040 | None | CM000337.2 | 34445840 | 34445933 | - | - |
| ptc-MIR156k | MI0002194 | None | CM000347.2 | 11956115 | 11956215 | - | - |
| ptc-MIR167d | MI0002238 | None | CM000341.2 | 22447920 | 22448024 | + | High |
| ptc-MIR397a | MI0002332 | None | CM000347.2 | 4146730 | 4146849 | + | - |
| ptc-MIR171i | MI0002285 | None | CM000341.2 | 7776851 | 7776985 | + | High |
| ptc-MIR159a | MI0002195 | None | CM000348.2 | 4086335 | 4086517 | - | High |
| ptc-MIR169a | MI0002245 | None | CM000337.2 | 3089790 | 3089954 | - | - |
| ptc-MIR159b | MI0002196 | None | CM000351.2 | 4261680 | 4261866 | + | High |
| osa-MIR528 | MI0003201 | 4611 | 3 | 1667328 | 1667415 | + | High |
| osa-MIR319a | MI0001098 | 527 | 1 | 26823282 | 26823472 | - | High |
| osa-MIR1425 | MI0006965 | 1196 | 5 | 8862149 | 8862250 | + | High |
| osa-MIR408 | MI0001149 | 581 | 1 | 12301661 | 12301873 | + | High |
| osa-MIR413 | MI0001433 | None | 12 | 10136381 | 10136493 | + | - |
| osa-MIR1423 | MI0006963 | 587 | 4 | 19715117 | 19715252 | + | Medium |
| osa-MIR426 | MI0001442 | 0 | 5 | 174006 | 174153 | + | - |
| osa-MIR156l | MI0001091 | 10220 | 5 | 5230609 | 5230764 | + | High |
| osa-MIR156k | MI0001090 | 871 | 9 | 18289107 | 18289212 | - | High |
| osa-MIR167d | MI0001109 | 56522 | 7 | 4166295 | 4166404 | - | High |
| osa-MIR1318 | MI0009715 | None | None | None | Low | ||
| osa-MIR820a | MI0005263 | 1532 | 1 | 14130479 | 14130669 | + | Low |
| osa-MIR397a | MI0001049 | 361 | 6 | 28489785 | 28489898 | + | High |
| osa-MIR171i | MI0001155 | 92 | 3 | 21191603 | 21191722 | + | High |
| osa-MIR159a | MI0001092 | 1717 | 1 | 17681923 | 17682194 | + | High |
| osa-MIR169a | MI0000679 | 3953 | 1 | 8729104 | 8729276 | + | Medium |
| osa-MIR2871a | MI0013035 | 65 | 5 | 3877013 | 3877133 | + | High |
| osa-MIR159b | MI0001093 | 1371 | 1 | 1215030 | 1215217 | + | High |
| osa-MIR3982 | MI0017258 | 18 | 11 | 1384740 | 1384958 | - | Medium |
| osa-MIR3979 | MI0017251 | 154 | 11 | 19480150 | 19480263 | + | High |