Stem-loop cel-mir-4814

Accession

MI0017544

Description

Caenorhabditis elegans cel-mir-4814 precursor miRNA

Sequence

749 reads, 5 reads per million, 13 experiments

uaaaccaacuuuacccacUUCUCAACCAACUUUGGCCACUuuucaacugccauucacagaagUGGGCAAAGUUGGUUGAGAAGUggguaaaguugggcaa
....((((((((((((((((((((((((((((((.((((((((..............)))))))).))))))))))))))))))))))))))))))....

Structure

uaaa                              G        caacug 
    ccaacuuuacccacUUCUCAACCAACUUUG CCACUuuu      c
    |||||||||||||||||||||||||||||| ||||||||       
    gguugaaaugggUGAAGAGUUGGUUGAAAC GGUgaaga      c
aacg                              G        cacuua 

Annotation confidence Medium

Genome context

chrIII: 13728414-13728513 [-]

Mature cel-miR-4814-5p

• Accession: MIMAT0020002
• Description: Caenorhabditis elegans cel-miR-4814-5p mature miRNA
• Sequence: 19 - UUCUCAACCAACUUUGGCCACU - 40
• Evidence: experimental ; Illumina [1]

Mature cel-miR-4814-3p

• Accession: MIMAT0020003
• Description: Caenorhabditis elegans cel-miR-4814-3p mature miRNA
• Sequence: 63 - UGGGCAAAGUUGGUUGAGAAGU - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21085120
   Formation, regulation and evolution of Caenorhabditis elegans 3'UTRs
   "Jan CH, Friedman RC, Ruby JG, Bartel DP"
   "Nature (2011) 469:97-101


2. PubMed ID: 21911355
   miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
   "Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N"
   "Nucleic Acids Res (2012) 40:37-52