Stem-loop sko-mir-4818g

Accession

MI0017555

Description

Saccoglossus kowalevskii sko-mir-4818g precursor miRNA

Sequence

aaugguuucuguuuaguuuggaucUCCAUUAUUGUAUGCUAUUAGUgaugauacuggucuAAUUGCACGCAAUAGUGGGGUUcuuaacaaauacccauccu
.((((....(((((.(((.(((.((((((((((((.(((.(((((.............))))).))).)))))))))))).))).)))))))).))))...

Structure

--a    uuuc     a   u   u            A   U     Ugaug 
   augg    uguuu guu gga cUCCAUUAUUGU UGC AUUAG     a
   ||||    ||||| ||| ||| |||||||||||| ||| |||||     u
   uacc    auaaa caa ucU GGGGUGAUAACG ACG UAAuc     a
ucc    ---c     -   u   U            C   U     ugguc 

Annotation confidence Low

Genome context

GL015416.1: 64531-64631 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from sko-mir-4818g

Mature sko-miR-4818g-5p

• Accession: MIMAT0020017
• Description: Saccoglossus kowalevskii sko-miR-4818g-5p mature miRNA
• Sequence: 25 - UCCAUUAUUGUAUGCUAUUAGU - 46
• Evidence: experimental ; 454 [1]

Mature sko-miR-4818g-3p

• Accession: MIMAT0020018
• Description: Saccoglossus kowalevskii sko-miR-4818g-3p mature miRNA
• Sequence: 61 - AAUUGCACGCAAUAGUGGGGUU - 82
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27