Stem-loop sko-mir-4830d

Accession

MI0017583

Description

Saccoglossus kowalevskii sko-mir-4830d precursor miRNA

Sequence

agugguuugugucuugcuggggUCUCUUGAGAGCCAUAUGGAGGaauugaauaguauuguccUCCAUAGGUCCUCCAGAGUCCucaguagauaaaaccuauc
...(((((.(((((.(((((((.((((.(((.(((.(((((((((..............)))))))))))).))).)))).)))))))))))))))))....

Structure

-agu     g     u       U    U   A   A         auugaa 
    gguuu ugucu gcugggg CUCU GAG GCC UAUGGAGGa      u
    ||||| ||||| ||||||| |||| ||| ||| |||||||||       
    ccaaa auaga ugacuCC GAGA CUC UGG AUACCUccu      a
cuau     -     -       U    C   C   -         guuaug 

Annotation confidence Low

Genome context

GL016280.1: 32659-32760 [-]

Mature sko-miR-4830d-5p

• Accession: MIMAT0020056
• Description: Saccoglossus kowalevskii sko-miR-4830d-5p mature miRNA
• Sequence: 23 - UCUCUUGAGAGCCAUAUGGAGG - 44
• Evidence: experimental ; 454 [1]

Mature sko-miR-4830d-3p

• Accession: MIMAT0020057
• Description: Saccoglossus kowalevskii sko-miR-4830d-3p mature miRNA
• Sequence: 63 - UCCAUAGGUCCUCCAGAGUCC - 83
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27