Stem-loop bfl-mir-4860

Accession

MI0017613

Description

Branchiostoma floridae bfl-mir-4860 precursor miRNA

Gene family

MIPF0001765; mir-4860

Sequence

acucucUGCCUGUCAACGUCUCUGUACAgugaacaugaggcaugUGUAGAGAUUGUGUGACGGGUAGUgagccc
.(((.(((((((((((((((((((((((((.........)).)))))))))).))).)))))))))).)))...

Structure

--a   u          -   -          -  gaa 
   cuc cUGCCUGUCA ACG UCUCUGUACA gu   c
   ||| |||||||||| ||| |||||||||| ||   a
   gag GAUGGGCAGU UGU AGAGAUGUgu cg   u
ccc   U          G   U          a  gag 

Annotation confidence Not enough data

Genome context

GG666538.1: 1823456-1823529 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-4860

Mature bfl-miR-4860-5p

• Accession: MIMAT0020088
• Description: Branchiostoma floridae bfl-miR-4860-5p mature miRNA
• Sequence: 7 - UGCCUGUCAACGUCUCUGUACA - 28
• Evidence: experimental ; 454 [1]

Mature bfl-miR-4860-3p

• Accession: MIMAT0020089
• Description: Branchiostoma floridae bfl-miR-4860-3p mature miRNA
• Sequence: 45 - UGUAGAGAUUGUGUGACGGGUAGU - 68
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27