Stem-loop bfl-mir-4865

Accession

MI0017620

Description

Branchiostoma floridae bfl-mir-4865 precursor miRNA

Gene family

MIPF0001750; mir-4865

Sequence

gugccugcugGCUUGUCACUUCCAAUACAUGCuguggucccaccaucccguccaUGUAGAGAGAGUGACAGGUUGUcgggccuc
..(((((.(((((((((((((.(..((((((..(((((...)))))......))))))..).))))))))))))).)))))...

Structure

-gu     c             C AA      ----Cu     c 
   gccug ugGCUUGUCACUU C  UACAUG      guggu  
   ||||| ||||||||||||| |  ||||||      ||||| c
   cgggc GUUGGACAGUGAG G  AUGUac      uacca  
cuc     U             A AG      cugccc     c 

Annotation confidence Not enough data

Genome context

GG666538.1: 1824327-1824410 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-4865

Mature bfl-miR-4865-5p

• Accession: MIMAT0020099
• Description: Branchiostoma floridae bfl-miR-4865-5p mature miRNA
• Sequence: 11 - GCUUGUCACUUCCAAUACAUGC - 32
• Evidence: experimental ; 454 [1]

Mature bfl-miR-4865-3p

• Accession: MIMAT0020100
• Description: Branchiostoma floridae bfl-miR-4865-3p mature miRNA
• Sequence: 55 - UGUAGAGAGAGUGACAGGUUGU - 76
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27