Stem-loop bfl-mir-4872c-2

Accession

MI0017633

Description

Branchiostoma floridae bfl-mir-4872c-2 precursor miRNA

Sequence

agagguucacaaguggUGUCAGGACGACAAAAGCUCUGAguucuguuaacaucagaguuuuguugccccgacuccuuuugugguca
......(((((((.((.(((.((.((((((((.(((((((((.....))).)))))))))))))).)).))).)).)))))))...

Structure

agaggu       u  U   A  A        G      -   c 
      ucacaag gg GUC GG CGACAAAA CUCUGA guu u
      ||||||| || ||| || |||||||| |||||| ||| g
      gguguuu cc cag cc guuguuuu gagacu caa u
---acu       u  u   c  c        -      a   u 

Annotation confidence Not enough data

Genome context

GG666674.1: 876370-876455 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-4872c-2

Mature bfl-miR-4872c

• Accession: MIMAT0020116
• Description: Branchiostoma floridae bfl-miR-4872c mature miRNA
• Sequence: 17 - UGUCAGGACGACAAAAGCUCUGA - 39
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27