Stem-loop bfl-mir-4882b

Accession

MI0017650

Description

Branchiostoma floridae bfl-mir-4882b precursor miRNA

Sequence

guaagucugacugaucacacuuguaggacuucucccuuuaaguauacaggGGAGAAACCUUUCAGGUGUCUUcagcauggcugaa
...((((((.((((..(((((((.(((..(((((((((.........))))))))).)))..)))))))..)))))).))))...

Structure

gua    -  a    uc       -u   ac         uaa 
   aguc ug cuga  acacuug  agg  uucucccuu   g
   |||| || ||||  |||||||  |||  |||||||||   u
   ucgg ac gacU  UGUGGAC  UCC  AAGAGGgga   a
aag    u  -    UC       UU   -A         cau 

Annotation confidence Not enough data

Genome context

GG666631.1: 1699499-1699583 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from bfl-mir-4882b

Mature bfl-miR-4882b

• Accession: MIMAT0020467
• Description: Branchiostoma floridae bfl-miR-4882b mature miRNA
• Sequence: 51 - GGAGAAACCUUUCAGGUGUCUU - 72
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27