Stem-loop bfl-mir-182d

Accession

MI0017666

Description

Branchiostoma floridae bfl-mir-182d precursor miRNA

Sequence

uuggcaagucugcuuggcacuggggaauccuuuguguuaaauguaaggcuuuuacaugguuguaucaUAGAAUUCCCCCGUACCGAGUGgacuuguuca
..(((((((((((((((.((.(((((((..((((((....((((((.....))))))........))))))))))))).)).)))))))))))))))..

Structure

uu               c  u       cc      ----uuaa      g 
  ggcaagucugcuugg ac ggggaau  uuugug        auguaa g
  ||||||||||||||| || |||||||  ||||||        |||||| c
  uuguucagGUGAGCC UG CCCCUUA  AGAUac        uacauu u
ac               A  C       --      uauguugg      u 

Annotation confidence Not enough data

Genome context

ref|NC_049980.1|: 17527938-17528036 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-182d

Mature bfl-miR-182d-3p

• Accession: MIMAT0020484
• Description: Branchiostoma floridae bfl-miR-182d-3p mature miRNA
• Sequence: 68 - UAGAAUUCCCCCGUACCGAGUG - 89
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27