Stem-loop bfl-mir-4900b-1

Accession

MI0017675

Description

Branchiostoma floridae bfl-mir-4900b-1 precursor miRNA

Sequence

auggccucaguuagggcuguucuucgcuggaguagcucugugacuaugggaccaUAGCUGCCUGGCGAAGAAUGGucccuugaggugcu
...(((((((...(((((((((((((((((.((((((.((.(.((...)).))).))))))))))))))))))))))).)))))))...

Structure

aug       uua                 a      c  u a  a 
   gccucag   gggcuguucuucgcugg guagcu ug g cu  
   |||||||   ||||||||||||||||| |||||| || | || u
   uggaguu   ccuGGUAAGAAGCGGUC CGUCGA ac c gg  
ucg       --c                 -      U  - a  g 

Annotation confidence Not enough data

Genome context

GG666468.1: 2410560-2410648 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from bfl-mir-4900b-1

Mature bfl-miR-4900b

• Accession: MIMAT0020493
• Description: Branchiostoma floridae bfl-miR-4900b mature miRNA
• Sequence: 55 - UAGCUGCCUGGCGAAGAAUGG - 75
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27