Accession
MI0017896
Description
Arabidopsis thaliana
ath-MIR5026 precursor miRNA
Sequence
1027209
reads,
13387.0
reads per million, 184 experiments
auaaaaagaaaauuauauuuacacgugucaaaAUCUGAGAUCGAUAAAUUUAACUcguggcacgacccugugaguuacuaacuuugaaaaccauagcauaguuuucaaaguuaguaACUCAUAAGAUCGUGACACGUgguaaaucuauugauuuuagauuuugauauguguaaaacaaaauuuucauuuuuau
((((((((((((((...(((((((((((((((((((((((((((((.(((((.(.((((.(((((.(.(((((((((((((((((((((((.........))))))))))))))))))))))).).))))).)))).).))))).)))))))))))))))))))))))))))))....))))))).)))))))
((((((((((((((...(((((((((((((((((((((((((((((.(((((.(.((((.(((((.(.(((((((((((((((((((((((.........))))))))))))))))))))))).).))))).)))).).))))).)))))))))))))))))))))))))))))....))))))).)))))))
Structure
- -aua A A U g c c cau
auaaaaa gaaaauu uuuacacgugucaaaAUCUGAGAUCGAUA AUUUA C cgug cacga c ugugaguuacuaacuuugaaaac a
||||||| ||||||| ||||||||||||||||||||||||||||| ||||| | |||| ||||| | ||||||||||||||||||||||| g
uauuuuu cuuuuaa aaauguguauaguuuuagauuuuaguuau uaaau g GCAC GUGCU G AUACUCAaugauugaaacuuuug c
a aaca c g U A A A aua
Annotation confidence
Medium
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Genome context
chr4: 7844496-7844688 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ath-MIR5026
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ath-miR5026-5p
| Accession | MIMAT0053915 |
| Description | Arabidopsis thaliana ath-miR5026-5p mature miRNA |
| Sequence | 33 - AUCUGAGAUCGAUAAAUUUAACU - 55 |
| Evidence |
experimental
unknown |
Mature ath-miR5026-3p
| Accession | MIMAT0020532 |
| Description | Arabidopsis thaliana ath-miR5026-3p mature miRNA |
| Sequence | 117 - ACUCAUAAGAUCGUGACACGU - 137 |
| Evidence |
experimental
Illumina [1-2] |
References
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