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High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis |
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|---|---|
| PubMed ID | 21940835 |
| Authors | "Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN" |
| Journal | "Genome Res |
| Volume | 22 |
| Pages | 163-176 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| ath-MIR5014a | MI0017882 | None | chr1 | 24553909 | 24554049 | + | - |
| ath-MIR5020a | MI0017888 | None | chr4 | 6791301 | 6791470 | - | - |
| ath-MIR5023 | MI0017892 | None | chr3 | 5496985 | 5497119 | - | - |
| ath-MIR5024 | MI0017894 | None | chr1 | 16766259 | 16766438 | - | - |
| ath-MIR5026 | MI0017896 | None | chr4 | 7844496 | 7844688 | + | - |
| ath-MIR5628 | MI0019199 | None | chr5 | 17985850 | 17985995 | + | - |
| ath-MIR5629 | MI0019200 | None | chr5 | 3802714 | 3803062 | + | - |
| ath-MIR5630a | MI0019201 | None | chr1 | 12011152 | 12011223 | - | - |
| ath-MIR5631 | MI0019202 | None | chr5 | 7122566 | 7122688 | - | - |
| ath-MIR5020c | MI0019203 | None | chr2 | 4770538 | 4770646 | + | - |
| ath-MIR5632 | MI0019204 | None | chr2 | 8392449 | 8392608 | - | - |
| ath-MIR5633 | MI0019205 | None | chr3 | 19544751 | 19545106 | + | - |
| ath-MIR5634 | MI0019206 | None | chr4 | 14982320 | 14982545 | + | - |
| ath-MIR5635a | MI0019207 | None | chr5 | 6926005 | 6926446 | + | - |
| ath-MIR5636 | MI0019208 | None | chr1 | 18549959 | 18550036 | + | - |
| ath-MIR5637 | MI0019209 | None | chr2 | 12270179 | 12270373 | - | - |
| ath-MIR5638a | MI0019210 | None | chr3 | 15336705 | 15337170 | - | - |
| ath-MIR5630b | MI0019211 | None | chr1 | 12023526 | 12023597 | - | - |
| ath-MIR5639 | MI0019212 | None | chr2 | 10356782 | 10357163 | + | - |
| ath-MIR5640 | MI0019213 | None | chr1 | 1653221 | 1653624 | - | - |
| ath-MIR5641 | MI0019214 | None | chr5 | 9022836 | 9023326 | + | - |
| ath-MIR5642a | MI0019215 | None | chr3 | 14196774 | 14197147 | + | - |
| ath-MIR5643a | MI0019216 | None | chr5 | 11667797 | 11667879 | + | - |
| ath-MIR5635d | MI0019217 | None | chr4 | 1023912 | 1024149 | + | - |
| ath-MIR5644 | MI0019218 | None | chr5 | 16649994 | 16650138 | + | - |
| ath-MIR5638b | MI0019219 | None | chr5 | 14099737 | 14100205 | + | - |
| ath-MIR5645a | MI0019220 | None | chr3 | 17418776 | 17419220 | + | - |
| ath-MIR5645b | MI0019221 | None | chr4 | 4889421 | 4889914 | + | - |
| ath-MIR5646 | MI0019222 | None | chr2 | 3517383 | 3517452 | - | - |
| ath-MIR5647 | MI0019223 | None | chr1 | 22084264 | 22084683 | - | - |
| ath-MIR5648 | MI0019224 | None | chr1 | 11499384 | 11499883 | + | - |
| ath-MIR5645c | MI0019225 | None | chr3 | 14742421 | 14742804 | + | - |
| ath-MIR5649a | MI0019226 | None | chr1 | 21360151 | 21360251 | + | - |
| ath-MIR5650 | MI0019227 | None | chr2 | 19686957 | 19687039 | + | - |
| ath-MIR858b | MI0019228 | None | chr1 | 26772633 | 26772935 | + | - |
| ath-MIR5635b | MI0019229 | None | chr1 | 20622538 | 20622719 | - | - |
| ath-MIR833b | MI0019230 | None | chr1 | 29525202 | 29525286 | - | - |
| ath-MIR781b | MI0019231 | None | chr1 | 7423521 | 7423607 | - | - |
| ath-MIR156i | MI0019232 | None | chr1 | 19806917 | 19807113 | - | - |
| ath-MIR5651 | MI0019233 | None | chr3 | 17178447 | 17178608 | + | - |
| ath-MIR156j | MI0019234 | None | chr2 | 17589020 | 17589087 | - | - |
| ath-MIR5652 | MI0019235 | None | chr1 | 23412989 | 23413436 | - | - |
| ath-MIR5653 | MI0019236 | None | chr1 | 19026915 | 19027000 | - | - |
| ath-MIR5654 | MI0019237 | None | chr1 | 11786292 | 11786371 | + | - |
| ath-MIR5655 | MI0019238 | None | chr2 | 18902541 | 18903035 | + | - |
| ath-MIR5635c | MI0019239 | None | chr4 | 13316754 | 13316927 | - | - |
| ath-MIR5656 | MI0019240 | None | chr1 | 1727263 | 1727415 | + | - |
| ath-MIR5657 | MI0019241 | None | chr5 | 9789582 | 9789666 | + | - |
| ath-MIR5658 | MI0019242 | None | chr4 | 18485438 | 18485531 | - | - |
| ath-MIR5659 | MI0019243 | None | chr5 | 16409804 | 16409862 | - | - |
| ath-MIR5645d | MI0019244 | None | chr1 | 16116572 | 16117041 | + | - |
| ath-MIR5660 | MI0019245 | None | chr4 | 5292626 | 5292820 | - | - |
| ath-MIR5642b | MI0019246 | None | chr2 | 2805 | 3176 | + | - |
| ath-MIR1888b | MI0019247 | None | chr3 | 22537283 | 22537417 | + | - |
| ath-MIR5649b | MI0019248 | None | chr1 | 21360151 | 21360251 | - | - |
| ath-MIR5661 | MI0019249 | None | chr4 | 10449329 | 10449409 | + | - |
| ath-MIR5662 | MI0019250 | None | chr2 | 16798584 | 16798870 | + | - |
| ath-MIR5663 | MI0019251 | None | chr1 | 18686855 | 18686966 | - | - |
| ath-MIR5645f | MI0019252 | None | chr5 | 14946671 | 14947169 | - | - |
| ath-MIR5664 | MI0019253 | None | chr1 | 17386795 | 17387008 | + | - |
| ath-MIR5665 | MI0019254 | None | chr5 | 19499055 | 19499533 | - | - |
| ath-MIR5666 | MI0019255 | None | chr1 | 12035047 | 12035135 | + | - |
| ath-MIR5643b | MI0019256 | None | chr5 | 11757140 | 11757222 | - | - |
| ath-MIR5645e | MI0019257 | None | chr4 | 5321227 | 5321643 | + | - |