Stem-loop ath-MIR5631

Accession

MI0019202

Description

Arabidopsis thaliana ath-MIR5631 precursor miRNA

Sequence

aaaauuauguccuuccugccauauuauauuuaggaaaaaauaauaucguauuauacauauaaacagaagccucuuaaauaauuuuuuccuaaauauauaauaUGGCAGGAAAGACAUAAUUUU
(((((((((((.(((((((((((((((((((((((((((((.((((.(((...)))))))....(((....)))......))))))))))))..))))))))))))))))).)))))))))))

Structure

           c                 --            -------------------a    c   u 
aaaauuauguc uuccugccauauuauau  uuaggaaaaaau                    auau gua  
||||||||||| |||||||||||||||||  ||||||||||||                    |||| ||| u
UUUUAAUACAG AAGGACGGUauaauaua  aauccuuuuuua                    uaua cau  
           A                 ua            auaaauucuccgaagacaaa    -   a 

Annotation confidence Not enough data

Genome context

chr5: 7122566-7122688 [-]

Mature ath-miR5631

• Accession: MIMAT0022390
• Description: Arabidopsis thaliana ath-miR5631 mature miRNA
• Sequence: 103 - UGGCAGGAAAGACAUAAUUUU - 123
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21940835
   High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis
   "Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN"
   "Genome Res (2012) 22:163-176