Stem-loop ath-MIR5636

Accession

MI0019208

Description

Arabidopsis thaliana ath-MIR5636 precursor miRNA

Sequence

agauCGUAGUUGCAGAGCUUGACGGcgcucauguuuacucuuuuuguuaaaugacgucaggcuuagccgcuuagguuu
.((((..(((.((.((((((((((....((((....((.......))...)))))))))))))).)).)))..)))).

Structure

a    GU   U  A          Gcgc    guuu  uc 
 gauC  AGU GC GAGCUUGACG    ucau    ac  u
 ||||  ||| || ||||||||||    ||||    ||  u
 uugg  ucg cg uucggacugc    agua    ug  u
u    au   c  a          ----    -aau  uu 

Annotation confidence Not enough data

Genome context

chr1: 18549959-18550036 [+]

Mature ath-miR5636

• Accession: MIMAT0022396
• Description: Arabidopsis thaliana ath-miR5636 mature miRNA
• Sequence: 5 - CGUAGUUGCAGAGCUUGACGG - 25
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21940835
   High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis
   "Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN"
   "Genome Res (2012) 22:163-176