miRBase entry: ath-MIR5659

Stem-loop ath-MIR5659


Accession
MI0019243
Description
Arabidopsis thaliana ath-MIR5659 precursor miRNA


Sequence

16582 reads, 86.0 reads per million, 171 experiments
uaucuuucaaagaccuucauugUUCUUGAAAUUCGACGAUGAAGGUCUUUGGAACGGUA
((((((((((((((((((((((((..........)))))))))))))))))))).))))

Structure
    -                    CUUG 
uauc uuucaaagaccuucauugUU    A
|||| ||||||||||||||||||||     
AUGG AAGGUUUCUGGAAGUAGCAG    A
    C                    CUUA 


Annotation confidence Low
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Genome context
chr5: 16409804-16409862 [-]

Database links

Mature ath-miR5659-5p

Accession MIMAT0053957
Description Arabidopsis thaliana ath-miR5659-5p mature miRNA
Sequence 23 - UUCUUGAAAUUCGACGAUGAAGGU - 46
Evidence experimental
unknown

Mature ath-miR5659-3p

Accession MIMAT0022432
Description Arabidopsis thaliana ath-miR5659-3p mature miRNA
Sequence 37 - CGAUGAAGGUCUUUGGAACGGUA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21940835
    High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis
    "Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN"
    "Genome Res (2012) 22:163-176