Stem-loop hvu-MIR5049a

Accession

MI0017936

Description

Hordeum vulgare hvu-MIR5049a precursor miRNA

Literature search

2 open access papers mention hvu-MIR5049a
(4 sentences)

Sequence

acucccucuguUCCUAAAUACUUGUUGUUGGGgagaacuagacuaguuuucugcaacaacaaguauugugguacggagggagu
(((((((((((.((..((((((((((((((.(((((((((...))))))))).))))))))))))))..)).)))))))))))

Structure

           U  UA              G         g 
acucccucugu CC  AAUACUUGUUGUUG Ggagaacua  
||||||||||| ||  |||||||||||||| ||||||||| a
ugagggaggca gg  uuaugaacaacaac ucuuuugau  
           u  ug              g         c 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvu-miR5049a

• Accession: MIMAT0020545
• Description: Hordeum vulgare hvu-miR5049a mature miRNA
• Sequence: 12 - UCCUAAAUACUUGUUGUUGGG - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21352554
   Discovery of barley miRNAs through deep sequencing of short reads
   Schreiber AW, Shi BJ, Huang CY, Langridge P, Baumann U
   BMC Genomics (2011) 12:129