Stem-loop hvu-MIR5051

Accession

MI0017938

Description

Hordeum vulgare hvu-MIR5051 precursor miRNA

Literature search

2 open access papers mention hvu-MIR5051
(2 sentences)

Sequence

gcagguacuguuccaguuucaagguuucaaagcugaaggcuucccagagauccugcugcuggguggucuuuagcUUUGGCACCUUGAAACUGGGAcuuuagcuuu
..((.((..((((((((((((((((.(((((((((((((((.(((((((......)).))))).))))))))))))))).))))))))))))))))..)).))..

Structure

gc  g  cu                u               u     -  au 
  ag ua  guuccaguuucaaggu ucaaagcugaaggcu cccag ag  c
  || ||  |||||||||||||||| ||||||||||||||| ||||| ||   
  uc au  cAGGGUCAAAGUUCCA GGUUUcgauuucugg ggguc uc  c
uu  g  uu                C               u     g  gu 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvu-miR5051

• Accession: MIMAT0020547
• Description: Hordeum vulgare hvu-miR5051 mature miRNA
• Sequence: 75 - UUUGGCACCUUGAAACUGGGA - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21352554
   Discovery of barley miRNAs through deep sequencing of short reads
   Schreiber AW, Shi BJ, Huang CY, Langridge P, Baumann U
   BMC Genomics (2011) 12:129