Stem-loop hvu-MIR5053

Accession

MI0017940

Description

Hordeum vulgare hvu-MIR5053 precursor miRNA

Literature search

1 open access papers mention hvu-MIR5053
(3 sentences)

Sequence

gcccaccucgccgccguaguuccaguugcugcuguugcucgagcucuccccguagcccagguucuccgacacguccagcaCGCAGCUGUAGUCGCCGGCGUccuugcaauc
((......(((((.((.(.(..((((((((((((..(((((.........)).)))...((....))........))))).))))))).).))).))))).....))....

Structure

----  ccaccu     c  u g uc       -     -----------------uu   -  agc 
    gc      cgccg cg a u  caguugc ugcug                   gcu cg   u
    ||      ||||| || | |  ||||||| |||||                   ||| ||   c
    cg      GCGGC GC U A  GUCGACG acgac                   cga gc   u
cuaa  -uuccU     C  - G -U       C     cugcacagccucuuggacc   u  ccc 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvu-miR5053

• Accession: MIMAT0020549
• Description: Hordeum vulgare hvu-miR5053 mature miRNA
• Sequence: 81 - CGCAGCUGUAGUCGCCGGCGU - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21352554
   Discovery of barley miRNAs through deep sequencing of short reads
   Schreiber AW, Shi BJ, Huang CY, Langridge P, Baumann U
   BMC Genomics (2011) 12:129