Accession
MI0017944
Description
Brachypodium distachyon
bdi-MIR5055 precursor miRNA
Sequence
gguuacaagcUCUCGCUGCUGAGCUCGGCGUugcguugcaaggagcagaguauuuaaccugcgccgacaguuguuaaacaggcaaggugggacuaaaaagggugucgccuacuguacuggcuggcgauggcaacugggcuguguggcgcaccgcagcugggccguuggcauacuggacuugccuguuuauaaaacugggcacgggucaaaacguucgauaucgccagcagggccauuguuu
....(((((((((.((((.(((..((((((((((.((((.....)))).)).....(((((.(((..(((((..((((((((((((((((.(((......))).))))))...((.((((.((.(((((((.....(((((((.(.....))))))))..))))))).))..)))))).))))))))))...)))))))).)))))...)))).))))..))).)))))))))..))))..
....(((((((((.((((.(((..((((((((((.((((.....)))).)).....(((((.(((..(((((..((((((((((((((((.(((......))).))))))...((.((((.((.(((((((.....(((((((.(.....))))))))..))))))).))..)))))).))))))))))...)))))))).)))))...)))).))))..))).)))))))))..))))..
Structure
gguu -- C C GC - gcguugcaaggagcagaguauuua c ga -gu aggugggacuaaaaagggugucgccuacu a -c g aacug u g
acaa gcUCU GCUG UGA UCGG CGUu accug gcc caguu uaaacaggca gu cugg ug cgauggc ggcugug g c
|||| ||||| |||| ||| |||| |||| ||||| ||| ||||| |||||||||| || |||| || ||||||| ||||||| | g
uguu cggga cgac gcu agcu gcaa ugggc cgg gucaa auuuguccgu ca gguc ac guugccg ucgacgc c c
--uu ac - c au u ---------------------aac a -- aau ----------------------------u - au g ---gg - a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This is a predicted homolog of a miRNA identified by Illumina deep sequencing in barley (Hordeum vulgare) [1].
Genome context
3: 13969508-13969748 [+]
Database links
Mature bdi-miR5055
| Accession | MIMAT0020553 |
| Description | Brachypodium distachyon bdi-miR5055 mature miRNA |
| Sequence | 11 - UCUCGCUGCUGAGCUCGGCGU - 31 |
| Evidence | not_experimental |
References
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