Accession
MI0017962
Description
Brachypodium distachyon
bdi-MIR5064 precursor miRNA
Sequence
ucaacgccagcugaugccauggcuucaaguacaccgaaugcuuucuccaucuugccgacuaagccauauccaucaaucagugaauuaaauguaauaacguugggucuuucaccuauauguauaaccaagucaaagauauccugugcauccacaacucuuccuucuuugcauagacuguuuauuauugaacugaagaacgcaauguuaggacaaggaaugccucugcucaucauuucagaaaccaacuccuucgcuuuaaccaaauuaccauacauacaaaaccgcugaauaagggagugauaaacaauuccguucgguuuuagucccauagcaaucaucugguCGAAUUUGUCCAUAGCAUCAGccagccgacc
.....((..((((((((.((((...(((((.(((((.(((...........((((.(((((((((...........((((((.......(((..((((((((.((.(((((.............................(((((((...................)))))))...(((((....)))))))))).)).))))))))..)))((((.((..((((..........))))...))..))))................................))))))..((.(((((........))))).)).)).))))))).....)))).))).)))).).))))).)))).))))))))..)).....
.....((..((((((((.((((...(((((.(((((.(((...........((((.(((((((((...........((((((.......(((..((((((((.((.(((((.............................(((((((...................)))))))...(((((....)))))))))).)).))))))))..)))((((.((..((((..........))))...))..))))................................))))))..((.(((((........))))).)).)).))))))).....)))).))).)))).).))))).)))).))))))))..)).....
Structure
ucaac ca c cuu a - a cuuucuccauc ----c - ----------------auauccaucaa ---------------------------------------------------------------aauuaaa aa g c ccuauauguauaaccaagucaaagauauccugugcauc
gc gcugaugc augg caagu c accg aug uugc gacuaag cc ucagug ugu uaacguug gu uuuca c
|| |||||||| |||| ||||| | |||| ||| |||| ||||||| || |||||| ||| |||||||| || ||||| a
cg cGACUACG UACC GUUUA G uggu uac aacg cugauuu gg agucgc aca auuguaac ca gaagu c
ccagc ac A --U A C c ----------u auacc u cuugccuuaacaaauagugagggaaua caaaacauacauaccauuaaaccaauuucgcuuccucaaccaaagacuuuacuacucgucuccguaagga gg g a caaguuauuauuugucagauacguuucuuccuucucaa
Annotation confidence
Not enough data
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Comments
This is a predicted homolog of a miRNA identified by Illumina deep sequencing in barley (Hordeum vulgare) [1].
Genome context
2: 38751727-38752100 [+]
Database links
Mature bdi-miR5064
| Accession | MIMAT0020571 |
| Description | Brachypodium distachyon bdi-miR5064 mature miRNA |
| Sequence | 344 - CGAAUUUGUCCAUAGCAUCAG - 364 |
| Evidence | not_experimental |
References
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