Stem-loop mmu-mir-5106

Accession

MI0018014

Symbol

MGI: Mir5106

Description

Mus musculus mmu-mir-5106 precursor miRNA

Literature search

1 open access papers mention mmu-mir-5106
(2 sentences)

Sequence

890 reads, 3.0 reads per million, 46 experiments

cacucgagCAACAACAACAGCAACAACccgagagccuaucuagggccuaggucuguAGCUCAGUUGGCAGAGU
.((((..((..((((...(((.((((((..((.((((.....)))))).))).))).)))..)))))).))))

Structure

c    ga  AA    AAC   A   -   cg  a    a 
 acuc  gC  CAAC   AGC ACA ACc  ag gccu u
 ||||  ||  ||||   ||| ||| |||  || |||| c
 UGAG  CG  GUUG   UCG ugu ugg  uc cggg u
-    -A  --    -AC   A   c   -a  -    a 

Annotation confidence Medium

Genome context

4: 44221195-44221267 [-]

Mature mmu-miR-5106-5p

• Accession: MIMAT0050732
• Description: Mus musculus mmu-miR-5106-5p mature miRNA
• Sequence: 9 - CAACAACAACAGCAACAAC - 27
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-5106-3p

• Accession: MIMAT0020613
• Description: Mus musculus mmu-miR-5106-3p mature miRNA
• Sequence: 57 - AGCUCAGUUGGCAGAGU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21403133
   Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage
   "Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S"
   "Blood (2011) 117:5340-5349