miRBase entry: mmu-mir-3473d

Stem-loop mmu-mir-3473d


Accession
MI0018033
Symbol
MGI: Mir3473d
Description
Mus musculus mmu-mir-3473d precursor miRNA mir-3473
Gene
family?
RF04204; mir-3473

Literature search
5 open access papers mention mmu-mir-3473d
(71 sentences)

Sequence

8278 reads, 15.0 reads per million, 114 experiments
ugugCUUAACCACUGAGCCACuuuccagcccuuugaaaacuuauuugagggcuggagagguggCUCAGUGGCUAAGAGCAC
.((((((..((((((((((((((((((((((((.............)))))))))))).))))))))))))....))))))

Structure
u      --AA            -            ugaaa 
 gugCUU    CCACUGAGCCAC uuuccagcccuu     a
 ||||||    |||||||||||| ||||||||||||     c
 CACGAG    GGUGACUCggug agaggucgggag     u
-      AAUC            g            uuuau 


Annotation confidence Medium
Do you think this miRNA is real?

Genome context
8: 111743082-111743162 [-]

Database links

Mature mmu-miR-3473d-5p

Accession MIMAT0020632
Description Mus musculus mmu-miR-3473d-5p mature miRNA
Sequence 5 - CUUAACCACUGAGCCAC - 21
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mmu-miR-3473d-3p

Accession MIMAT0050738
Description Mus musculus mmu-miR-3473d-3p mature miRNA
Sequence 64 - CUCAGUGGCUAAGAGCAC - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21403133
    Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage
    "Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S"
    "Blood (2011) 117:5340-5349