miRBase entry: hsa-mir-5583-2

Stem-loop hsa-mir-5583-2


Accession
MI0019140
Symbol
HGNC: MIR5583-2
Description
Homo sapiens hsa-mir-5583-2 precursor miRNA


Sequence

399 reads, 21 reads per million, 16 experiments
AAACUAAUAUACCCAUAUUCUGaugaucaccuagccaGAAUAUGGGUAUAUUAGUUUGG
((((((((((((((((((((((.............))))))))))))))))))))))..

Structure
--                      augau 
  AAACUAAUAUACCCAUAUUCUG     c
  ||||||||||||||||||||||     a
  UUUGAUUAUAUGGGUAUAAGac     c
GG                      cgauc 


Annotation confidence High
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Genome context
chr18: 39676719-39676777 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from hsa-mir-5583-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hsa-miR-5583-5p

Accession MIMAT0022281
Description Homo sapiens hsa-miR-5583-5p mature miRNA
Sequence 1 - AAACUAAUAUACCCAUAUUCUG - 22
Evidence not_experimental

Mature hsa-miR-5583-3p

Accession MIMAT0022282
Description Homo sapiens hsa-miR-5583-3p mature miRNA
Sequence 38 - GAAUAUGGGUAUAUUAGUUUGG - 59
Evidence not_experimental

References

  1. PubMed ID: 21911355
    miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
    "Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N"
    "Nucleic Acids Res (2012) 40:37-52