Stem-loop cel-mir-356b

Accession

MI0019158

Description

Caenorhabditis elegans cel-mir-356b precursor miRNA

Literature search

2 open access papers mention cel-mir-356b
(3 sentences)

Sequence

214 reads, 4 reads per million, 13 experiments

UGGUGAGACACGUCGUAACGAAUccgcugaaauuuacauugaugaUUUGUUCGCGUUGCUCAACCACA
(((((((..(((.((.((((((((..(.............)..)))))))))))))..))).))))..

Structure

--    -   AC   U  U        cg ugaaa 
  UGGU GAG  ACG CG AACGAAUc  c     u
  |||| |||  ||| || ||||||||  |     u
  ACCA CUC  UGC GC UUGUUUag  g     u
AC    A   GU   -  -        ua uuaca 

Annotation confidence High

Genome context

chrIII: 7860167-7860234 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cel-mir-356b

Mature cel-miR-356b-5p

• Accession: MIMAT0022311
• Description: Caenorhabditis elegans cel-miR-356b-5p mature miRNA
• Sequence: 1 - UGGUGAGACACGUCGUAACGAAU - 23
• Evidence: not_experimental

Mature cel-miR-356b-3p

• Accession: MIMAT0022312
• Description: Caenorhabditis elegans cel-miR-356b-3p mature miRNA
• Sequence: 46 - UUUGUUCGCGUUGCUCAACCACA - 68
• Evidence: not_experimental

References

1. PubMed ID: 21911355
   miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
   "Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N"
   "Nucleic Acids Res (2012) 40:37-52