miRBase entry: cel-mir-5595

Stem-loop cel-mir-5595


Accession
MI0019159
Description
Caenorhabditis elegans cel-mir-5595 precursor miRNA


Sequence

37 reads, 2 reads per million, 11 experiments
UCUCUUUUUUCUCGCAUGCCAUCUcaaaacaucgauggcgagAGAGCGUGUGGAGAAGAGAGACG
(((((((((((.(((((((..((((..............))))..))))))))))))))))))..

Structure
--           U       CA    aaaaca 
  UCUCUUUUUUC CGCAUGC  UCUc      u
  ||||||||||| |||||||  ||||       
  AGAGAGAAGAG GUGUGCG  Agag      c
GC           -       AG    cgguag 


Annotation confidence Not enough data
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Genome context
chrII: 14399565-14399629 [-]

Database links

Mature cel-miR-5595-5p

Accession MIMAT0022313
Description Caenorhabditis elegans cel-miR-5595-5p mature miRNA
Sequence 1 - UCUCUUUUUUCUCGCAUGCCAUCU - 24
Evidence not_experimental

Mature cel-miR-5595-3p

Accession MIMAT0022314
Description Caenorhabditis elegans cel-miR-5595-3p mature miRNA
Sequence 43 - AGAGCGUGUGGAGAAGAGAGACG - 65
Evidence not_experimental
Database links

References

  1. PubMed ID: 21911355
    miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
    "Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N"
    "Nucleic Acids Res (2012) 40:37-52